Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm22543-201ENSMUST00000104347 94 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm12757-201ENSMUST00000119465 800 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm6969-201ENSMUST00000140065 342 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm23781-201ENSMUST00000157940 308 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm24002-201ENSMUST00000158456 104 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm2959-201ENSMUST00000169844 621 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm20401-201ENSMUST00000173717 212 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm27254-201ENSMUST00000183926 517 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm36954-201ENSMUST00000195362 363 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Mir142-201ENSMUST00000198092 64 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm43028-201ENSMUST00000202561 481 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm29793-201ENSMUST00000202874 460 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm6590-201ENSMUST00000203343 687 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm17779-201ENSMUST00000213395 394 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gm17872-201ENSMUST00000222550 532 ntBASIC4.25□□□□□ -1.73
Trim40Q3UWA4 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trim40Q3UWA4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm25647-201ENSMUST00000101832 78 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm25823-201ENSMUST00000101995 78 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm12392-201ENSMUST00000118014 938 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm12577-201ENSMUST00000119701 574 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm14714-201ENSMUST00000119743 439 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm11797-201ENSMUST00000121336 754 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm14363-201ENSMUST00000122304 409 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm13092-201ENSMUST00000136346 260 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm22819-201ENSMUST00000157445 303 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm24220-201ENSMUST00000177753 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm25988-201ENSMUST00000177759 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm23471-201ENSMUST00000177886 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm26488-201ENSMUST00000178225 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm23449-201ENSMUST00000179208 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm25221-201ENSMUST00000180051 79 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm27039-201ENSMUST00000182438 962 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm37636-201ENSMUST00000193583 359 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm43841-201ENSMUST00000199491 586 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm2011-203ENSMUST00000203750 435 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm44521-201ENSMUST00000206469 217 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm18387-201ENSMUST00000220333 702 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Gm25187-201ENSMUST00000083906 133 ntBASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim40Q3UWA4 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms