Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm15426-201ENSMUST00000117823 556 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm11698-201ENSMUST00000117948 455 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm14655-201ENSMUST00000120124 578 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm8200-201ENSMUST00000122390 222 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm22312-201ENSMUST00000158005 130 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm6057-201ENSMUST00000195927 314 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm43586-201ENSMUST00000195948 310 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm43856-201ENSMUST00000197004 369 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm44376-201ENSMUST00000197570 128 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.6□□□□□ -1.67
Upf3bQ3ULL6 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm14628-201ENSMUST00000117508 635 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm14916-201ENSMUST00000121904 204 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm15795-201ENSMUST00000160969 553 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm6863-201ENSMUST00000052882 636 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm23099-201ENSMUST00000083454 139 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Mir215-201ENSMUST00000083628 112 ntBASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3bQ3ULL6 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Upf3bQ3ULL6 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.59□□□□□ -1.68
Upf3bQ3ULL6 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm22657-201ENSMUST00000104197 132 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms