Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm3213-201ENSMUST00000219296 441 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3aQ3ULJ3 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm12252-201ENSMUST00000119517 219 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm5924-201ENSMUST00000132554 871 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm23958-201ENSMUST00000157207 105 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm3191-201ENSMUST00000167139 346 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Mir3058-201ENSMUST00000175126 91 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm22254-201ENSMUST00000179186 110 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm29428-201ENSMUST00000190086 409 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm19086-201ENSMUST00000190772 665 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm44485-201ENSMUST00000199569 137 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm42666-201ENSMUST00000201954 152 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm44032-201ENSMUST00000204841 166 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm21112-201ENSMUST00000212224 578 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm7760-201ENSMUST00000212265 578 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm17779-201ENSMUST00000213395 394 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3aQ3ULJ3 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm11781-201ENSMUST00000118328 472 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm22588-201ENSMUST00000157510 140 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm20673-201ENSMUST00000177167 430 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm4410-201ENSMUST00000199349 686 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm31931-201ENSMUST00000219666 222 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upf3aQ3ULJ3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Mir1193-201ENSMUST00000116761 121 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm7834-201ENSMUST00000117560 437 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm13567-201ENSMUST00000118026 247 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm12638-201ENSMUST00000119531 298 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms