Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm13728-201ENSMUST00000117471 400 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm14794-201ENSMUST00000118181 192 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm13751-201ENSMUST00000120280 752 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm12884-201ENSMUST00000120371 325 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm25224-201ENSMUST00000158195 68 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm5974-201ENSMUST00000181607 986 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Mir8118-201ENSMUST00000183962 129 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm29332-201ENSMUST00000190829 227 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm44463-201ENSMUST00000198895 137 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm2059-201ENSMUST00000212025 287 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm5176-202ENSMUST00000220267 583 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm25139-201ENSMUST00000083247 210 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox9Q04887 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.67□□□□□ -1.5
Sox9Q04887 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm22899-201ENSMUST00000104540 131 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Mir467h-201ENSMUST00000116759 121 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm11633-201ENSMUST00000118176 444 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm11890-201ENSMUST00000119585 417 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm15452-201ENSMUST00000119877 240 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm12237-201ENSMUST00000120158 470 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm12006-201ENSMUST00000120786 403 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm26153-201ENSMUST00000157433 127 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm26349-201ENSMUST00000157530 130 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm23534-201ENSMUST00000157539 97 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm3531-201ENSMUST00000162698 489 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm17177-201ENSMUST00000169144 483 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm7128-201ENSMUST00000211639 533 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm45722-201ENSMUST00000213075 466 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Gm6906-201ENSMUST00000218014 569 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox9Q04887 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms