Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm8106-201ENSMUST00000213123 523 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm24144-201ENSMUST00000082632 111 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Col6a1Q04857 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Mir467g-201ENSMUST00000116906 120 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm6587-201ENSMUST00000120219 613 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm11805-201ENSMUST00000121238 600 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm22076-201ENSMUST00000158601 84 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm25525-201ENSMUST00000177701 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm26178-201ENSMUST00000177706 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm24315-201ENSMUST00000177835 127 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm26465-201ENSMUST00000178517 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm24317-201ENSMUST00000178536 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm25021-201ENSMUST00000179184 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm22995-201ENSMUST00000179670 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm24424-201ENSMUST00000179714 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm24389-201ENSMUST00000179962 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm25672-201ENSMUST00000180111 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm7870-201ENSMUST00000184467 616 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28604-201ENSMUST00000186629 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28566-201ENSMUST00000186714 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28194-201ENSMUST00000187412 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28886-202ENSMUST00000187889 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29163-201ENSMUST00000188029 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28066-201ENSMUST00000188657 472 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28554-202ENSMUST00000189175 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29213-202ENSMUST00000189703 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28851-202ENSMUST00000189757 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28461-201ENSMUST00000190023 484 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms