Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H3f3aP84244 Gm43825-201ENSMUST00000199650 734 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Gm44946-201ENSMUST00000208425 572 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.85□□□□□ -1.79
H3f3aP84244 Gm46138-201ENSMUST00000215294 426 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.85□□□□□ -1.79
H3f3aP84244 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3f3aP84244 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
H3f3aP84244 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
H3f3aP84244 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
H3f3aP84244 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H3f3aP84244 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.85□□□□□ -1.79
H3f3aP84244 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3f3aP84244 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H3f3aP84244 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3f3aP84244 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm24469-201ENSMUST00000104487 131 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm11698-201ENSMUST00000117948 455 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm11877-201ENSMUST00000118921 852 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm11398-201ENSMUST00000120330 320 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
H3f3aP84244 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm17421-201ENSMUST00000167845 674 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm6155-201ENSMUST00000173735 341 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm43774-201ENSMUST00000196327 878 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm45200-201ENSMUST00000207434 919 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm44543-201ENSMUST00000209136 396 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 CR974592.1-201ENSMUST00000220422 574 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.84□□□□□ -1.79
H3f3aP84244 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3f3aP84244 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H3f3aP84244 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
H3f3aP84244 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
H3f3aP84244 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3f3aP84244 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 AC174797.3-203ENSMUST00000225749 2078 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
H3f3aP84244 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm43826-201ENSMUST00000199604 2612 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Gm22778-201ENSMUST00000104090 128 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Gm25806-201ENSMUST00000122782 122 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3f3aP84244 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.83□□□□□ -1.8
H3f3aP84244 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm25037-201ENSMUST00000175418 110 ntBASIC3.83□□□□□ -1.8
H3f3aP84244 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H3f3aP84244 Gm27875-201ENSMUST00000184425 123 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms