Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm3338-201ENSMUST00000220982 269 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm272-201ENSMUST00000222073 919 ntBASIC5.07□□□□□ -1.6
CiitaP79621 AC140209.1-201ENSMUST00000227875 284 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm22444-201ENSMUST00000093693 108 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CiitaP79621 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CiitaP79621 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.07□□□□□ -1.6
CiitaP79621 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm14878-201ENSMUST00000118167 293 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm15012-201ENSMUST00000119176 106 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm12379-201ENSMUST00000119607 391 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm15885-201ENSMUST00000122114 388 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm16373-201ENSMUST00000129517 303 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm23121-201ENSMUST00000157653 173 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm23501-201ENSMUST00000157744 256 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Gm17060-201ENSMUST00000172394 824 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm28191-201ENSMUST00000189112 211 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm37167-201ENSMUST00000194946 396 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm38221-201ENSMUST00000195146 365 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm42694-201ENSMUST00000196951 358 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm43825-201ENSMUST00000199650 734 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm6590-201ENSMUST00000203343 687 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm8679-201ENSMUST00000210651 1036 ntBASIC5.06□□□□□ -1.6
CiitaP79621 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.06□□□□□ -1.6
CiitaP79621 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Mecom-201ENSMUST00000061088 348 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm24144-201ENSMUST00000082632 111 ntBASIC5.06□□□□□ -1.6
CiitaP79621 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CiitaP79621 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CiitaP79621 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CiitaP79621 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CiitaP79621 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CiitaP79621 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CiitaP79621 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CiitaP79621 Gm24935-201ENSMUST00000103770 110 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm14388-201ENSMUST00000118119 477 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm5924-201ENSMUST00000132554 871 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CiitaP79621 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Gm25150-201ENSMUST00000157121 60 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm24444-201ENSMUST00000157244 308 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm15796-201ENSMUST00000162135 204 ntBASIC5.05□□□□□ -1.6
CiitaP79621 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Gm4842-201ENSMUST00000183237 835 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm27875-201ENSMUST00000184425 123 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm9238-201ENSMUST00000196181 329 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm43774-201ENSMUST00000196327 878 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm43478-201ENSMUST00000200381 292 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Gm45857-201ENSMUST00000212207 356 ntBASIC5.05□□□□□ -1.6
CiitaP79621 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.05□□□□□ -1.6
CiitaP79621 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Diaph3-206ENSMUST00000226745 713 ntBASIC5.05□□□□□ -1.6
CiitaP79621 AC154692.1-201ENSMUST00000228314 544 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CiitaP79621 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CiitaP79621 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
CiitaP79621 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CiitaP79621 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.05□□□□□ -1.6
CiitaP79621 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CiitaP79621 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CiitaP79621 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CiitaP79621 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms