Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.93□□□□□ -1.62
NcanP55066 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NcanP55066 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.93□□□□□ -1.62
NcanP55066 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.93□□□□□ -1.62
NcanP55066 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NcanP55066 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.92□□□□□ -1.62
NcanP55066 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NcanP55066 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NcanP55066 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NcanP55066 Gm12039-201ENSMUST00000118219 180 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm12465-201ENSMUST00000118591 300 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NcanP55066 Gm25977-201ENSMUST00000158697 85 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm29031-201ENSMUST00000185316 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm29000-201ENSMUST00000185444 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm28204-201ENSMUST00000185934 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm28290-201ENSMUST00000186505 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm28161-201ENSMUST00000186669 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm28749-209ENSMUST00000189599 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Gm32447-201ENSMUST00000194265 697 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm33163-201ENSMUST00000194504 614 ntBASIC4.92□□□□□ -1.62
NcanP55066 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.92□□□□□ -1.62
NcanP55066 Gm34779-201ENSMUST00000210036 263 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm45392-201ENSMUST00000210441 214 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm7380-201ENSMUST00000211599 466 ntBASIC4.92□□□□□ -1.62
NcanP55066 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.92□□□□□ -1.62
NcanP55066 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.92□□□□□ -1.62
NcanP55066 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm6195-201ENSMUST00000063059 357 ntBASIC4.92□□□□□ -1.62
NcanP55066 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NcanP55066 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NcanP55066 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NcanP55066 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NcanP55066 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.92□□□□□ -1.62
NcanP55066 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NcanP55066 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.92□□□□□ -1.62
NcanP55066 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.92□□□□□ -1.62
NcanP55066 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.92□□□□□ -1.62
NcanP55066 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NcanP55066 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.91□□□□□ -1.62
NcanP55066 AW046200-203ENSMUST00000211787 2479 ntBASIC4.91□□□□□ -1.62
NcanP55066 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Gm11409-201ENSMUST00000118621 403 ntBASIC4.91□□□□□ -1.62
NcanP55066 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.91□□□□□ -1.62
NcanP55066 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm24371-201ENSMUST00000122662 267 ntBASIC4.91□□□□□ -1.62
NcanP55066 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.91□□□□□ -1.62
NcanP55066 Gm24503-201ENSMUST00000158454 135 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm21999-201ENSMUST00000165985 387 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm37241-201ENSMUST00000191736 523 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm43765-201ENSMUST00000196303 893 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm9317-201ENSMUST00000197055 862 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm42428-201ENSMUST00000198677 302 ntBASIC4.91□□□□□ -1.62
NcanP55066 Gm18537-201ENSMUST00000205709 989 ntBASIC4.91□□□□□ -1.62
NcanP55066 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.91□□□□□ -1.62
NcanP55066 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.91□□□□□ -1.62
NcanP55066 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.91□□□□□ -1.62
NcanP55066 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.91□□□□□ -1.62
NcanP55066 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NcanP55066 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.91□□□□□ -1.62
NcanP55066 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NcanP55066 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.91□□□□□ -1.62
NcanP55066 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.91□□□□□ -1.62
NcanP55066 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NcanP55066 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NcanP55066 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms