Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.94□□□□□ -1.78
Nkx2-1P50220 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.94□□□□□ -1.78
Nkx2-1P50220 Gm37174-201ENSMUST00000194699 3058 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm8202-201ENSMUST00000117682 310 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm15382-201ENSMUST00000118011 537 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm12901-201ENSMUST00000118690 532 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm12788-201ENSMUST00000119090 308 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm11805-201ENSMUST00000121238 600 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm16471-201ENSMUST00000121940 618 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm14907-201ENSMUST00000121948 854 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm24395-201ENSMUST00000158139 125 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm25520-201ENSMUST00000158389 118 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Mir1963-201ENSMUST00000158594 59 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm16563-201ENSMUST00000162673 423 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm27039-201ENSMUST00000182438 962 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm27225-201ENSMUST00000183833 557 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm19231-201ENSMUST00000193212 830 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm37272-201ENSMUST00000193401 488 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm37243-201ENSMUST00000193407 595 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm38008-201ENSMUST00000195333 518 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm17984-201ENSMUST00000205286 859 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm45026-201ENSMUST00000205292 833 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm8556-201ENSMUST00000210437 664 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 AC151971.3-201ENSMUST00000214694 404 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 AC131745.1-201ENSMUST00000223660 330 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm6065-201ENSMUST00000081336 492 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm26437-201ENSMUST00000082595 105 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Snora52-201ENSMUST00000082732 137 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Gm23102-201ENSMUST00000083724 116 ntBASIC3.93□□□□□ -1.78
Nkx2-1P50220 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx2-1P50220 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm25758-201ENSMUST00000103987 129 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm22273-201ENSMUST00000104040 132 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm15745-201ENSMUST00000119807 115 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm11197-201ENSMUST00000145158 839 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm26347-201ENSMUST00000157526 131 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm22339-201ENSMUST00000157718 62 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm24734-201ENSMUST00000158860 262 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm9027-201ENSMUST00000165914 661 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.92□□□□□ -1.78
Nkx2-1P50220 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.92□□□□□ -1.78
Nkx2-1P50220 Mir3080-201ENSMUST00000175010 79 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms