Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.39□□□□□ -1.55
Traf1P39428 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Traf1P39428 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Traf1P39428 Mecom-201ENSMUST00000061088 348 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Traf1P39428 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Traf1P39428 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Traf1P39428 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Traf1P39428 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Traf1P39428 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.38□□□□□ -1.55
Traf1P39428 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Traf1P39428 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Traf1P39428 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Traf1P39428 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Gm22498-201ENSMUST00000104497 86 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm12465-201ENSMUST00000118591 300 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm24444-201ENSMUST00000157244 308 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Zakit-201ENSMUST00000157677 308 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm25605-201ENSMUST00000158364 124 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Samd15-201ENSMUST00000169669 1194 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm37836-201ENSMUST00000195875 175 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm43825-201ENSMUST00000199650 734 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm45072-201ENSMUST00000208673 929 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm45608-201ENSMUST00000210948 389 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Gm18387-201ENSMUST00000220333 702 ntBASIC5.38□□□□□ -1.55
Traf1P39428 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.38□□□□□ -1.55
Traf1P39428 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.38□□□□□ -1.55
Traf1P39428 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Traf1P39428 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Traf1P39428 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Traf1P39428 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Traf1P39428 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Traf1P39428 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Traf1P39428 Gm22473-201ENSMUST00000104114 132 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm23014-201ENSMUST00000104144 130 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm14304-201ENSMUST00000117272 446 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm14854-201ENSMUST00000117758 841 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm12231-201ENSMUST00000119447 695 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm4852-201ENSMUST00000121202 729 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm14840-201ENSMUST00000122135 594 ntBASIC5.37□□□□□ -1.55
Traf1P39428 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Gm6245-201ENSMUST00000164699 768 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.37□□□□□ -1.55
Traf1P39428 Gm27568-201ENSMUST00000184220 99 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm29556-201ENSMUST00000187591 696 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm37878-201ENSMUST00000192108 387 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm37088-201ENSMUST00000193887 406 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.37□□□□□ -1.55
Traf1P39428 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.37□□□□□ -1.55
Traf1P39428 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 AC122924.1-201ENSMUST00000222044 163 ntBASIC5.37□□□□□ -1.55
Traf1P39428 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.37□□□□□ -1.55
Traf1P39428 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Traf1P39428 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Traf1P39428 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Traf1P39428 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Traf1P39428 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Traf1P39428 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Traf1P39428 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Traf1P39428 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.36□□□□□ -1.55
Traf1P39428 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Traf1P39428 Gm23709-201ENSMUST00000104364 130 ntBASIC5.36□□□□□ -1.55
Traf1P39428 Gm12880-201ENSMUST00000120652 494 ntBASIC5.36□□□□□ -1.55
Traf1P39428 Gm14776-201ENSMUST00000121029 887 ntBASIC5.36□□□□□ -1.55
Traf1P39428 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 Gm19891-201ENSMUST00000189771 303 ntBASIC5.36□□□□□ -1.55
Traf1P39428 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.36□□□□□ -1.55
Traf1P39428 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms