Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm37304-201ENSMUST00000193833 2886 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm12931-201ENSMUST00000117046 324 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm12252-201ENSMUST00000119517 219 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm24730-201ENSMUST00000158228 117 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm26402-201ENSMUST00000158499 113 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm22940-201ENSMUST00000158560 155 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.53□□□□□ -1.36
Col18a1P39061 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm43044-201ENSMUST00000198091 379 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm4859-201ENSMUST00000199625 787 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm44002-201ENSMUST00000205134 594 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.53□□□□□ -1.36
Col18a1P39061 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Col18a1P39061 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col18a1P39061 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.53□□□□□ -1.36
Col18a1P39061 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.53□□□□□ -1.36
Col18a1P39061 Gm44250-201ENSMUST00000203092 4229 ntBASIC6.52□□□□□ -1.36
Col18a1P39061 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.52□□□□□ -1.36
Col18a1P39061 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm11409-201ENSMUST00000118621 403 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.52□□□□□ -1.37
Col18a1P39061 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Col18a1P39061 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm10552-201ENSMUST00000113396 372 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm12393-201ENSMUST00000117084 848 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm13672-201ENSMUST00000117554 459 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm12486-201ENSMUST00000120887 541 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Mir5134-201ENSMUST00000175529 78 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm11394-201ENSMUST00000181421 517 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm27317-201ENSMUST00000183533 95 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm4526-201ENSMUST00000186039 920 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Col18a1P39061 Gm3565-201ENSMUST00000222670 609 ntBASIC6.52□□□□□ -1.37
Col18a1P39061 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col18a1P39061 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col18a1P39061 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col18a1P39061 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm22269-201ENSMUST00000104002 130 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm4914-201ENSMUST00000119757 459 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm14360-201ENSMUST00000120670 393 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm16260-201ENSMUST00000155141 304 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm22390-201ENSMUST00000157588 325 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col18a1P39061 Gm20612-201ENSMUST00000176318 236 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.51□□□□□ -1.37
Col18a1P39061 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 AC157017.1-201ENSMUST00000220148 364 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms