Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Mir92b-201ENSMUST00000102300 83 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm22266-201ENSMUST00000104011 138 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm22272-201ENSMUST00000104039 134 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm24160-201ENSMUST00000104594 126 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm15560-201ENSMUST00000117107 643 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm14890-201ENSMUST00000117660 676 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm12311-201ENSMUST00000118803 374 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm15120-201ENSMUST00000120602 301 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm25176-201ENSMUST00000122640 125 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm26171-201ENSMUST00000158422 131 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm24636-201ENSMUST00000158673 288 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm27551-201ENSMUST00000184258 77 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm37111-201ENSMUST00000193250 634 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm43408-201ENSMUST00000198263 440 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC3.83□□□□□ -1.8
Cdx1P18111 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm36247-201ENSMUST00000211834 285 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC3.83□□□□□ -1.8
Cdx1P18111 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Diaph3-206ENSMUST00000226745 713 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Cdx1P18111 AC102291.1-201ENSMUST00000227164 529 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm23626-201ENSMUST00000082458 133 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Cdx1P18111 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm45222-201ENSMUST00000207029 4307 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm3267-201ENSMUST00000118671 473 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm14586-201ENSMUST00000119571 408 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm23743-201ENSMUST00000157389 274 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm6486-201ENSMUST00000166202 434 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Mir6344-201ENSMUST00000183462 104 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm29086-201ENSMUST00000186774 222 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm29085-201ENSMUST00000187108 225 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms