Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm15970-201ENSMUST00000160623 834 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm24757-201ENSMUST00000176987 371 ntBASIC6.27□□□□□ -1.41
RaraP11416 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm26970-201ENSMUST00000182990 964 ntBASIC6.27□□□□□ -1.41
RaraP11416 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RaraP11416 Gm37586-201ENSMUST00000193654 204 ntBASIC6.27□□□□□ -1.41
RaraP11416 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RaraP11416 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.27□□□□□ -1.41
RaraP11416 Gm42539-201ENSMUST00000197009 308 ntBASIC6.27□□□□□ -1.41
RaraP11416 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm43142-201ENSMUST00000198670 361 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm44818-201ENSMUST00000206608 358 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm17780-201ENSMUST00000207142 612 ntBASIC6.27□□□□□ -1.41
RaraP11416 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.27□□□□□ -1.41
RaraP11416 AC116589.7-201ENSMUST00000221061 239 ntBASIC6.27□□□□□ -1.41
RaraP11416 AC164117.1-201ENSMUST00000221726 239 ntBASIC6.27□□□□□ -1.41
RaraP11416 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.27□□□□□ -1.41
RaraP11416 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.27□□□□□ -1.41
RaraP11416 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.27□□□□□ -1.41
RaraP11416 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RaraP11416 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.26□□□□□ -1.41
RaraP11416 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RaraP11416 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.26□□□□□ -1.41
RaraP11416 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RaraP11416 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
RaraP11416 Gm14987-201ENSMUST00000117820 676 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm15034-201ENSMUST00000120043 349 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm16100-201ENSMUST00000120489 231 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm15237-201ENSMUST00000122104 469 ntBASIC6.26□□□□□ -1.41
RaraP11416 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.26□□□□□ -1.41
RaraP11416 Gm25013-201ENSMUST00000158402 128 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm22428-201ENSMUST00000158554 132 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm16164-201ENSMUST00000160078 468 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RaraP11416 Gm17511-201ENSMUST00000172206 342 ntBASIC6.26□□□□□ -1.41
RaraP11416 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm22646-201ENSMUST00000175130 115 ntBASIC6.26□□□□□ -1.41
RaraP11416 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.26□□□□□ -1.41
RaraP11416 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Mir7082-201ENSMUST00000183526 92 ntBASIC6.26□□□□□ -1.41
RaraP11416 Mir6244-201ENSMUST00000184156 117 ntBASIC6.26□□□□□ -1.41
RaraP11416 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm36985-201ENSMUST00000195595 379 ntBASIC6.26□□□□□ -1.41
RaraP11416 Gm44374-201ENSMUST00000199821 140 ntBASIC6.26□□□□□ -1.41
RaraP11416 AC162931.1-201ENSMUST00000214184 267 ntBASIC6.26□□□□□ -1.41
RaraP11416 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.26□□□□□ -1.41
RaraP11416 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6.26□□□□□ -1.41
RaraP11416 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.26□□□□□ -1.41
RaraP11416 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.26□□□□□ -1.41
RaraP11416 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.26□□□□□ -1.41
RaraP11416 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RaraP11416 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RaraP11416 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RaraP11416 Gm23404-201ENSMUST00000082543 97 ntBASIC6.26□□□□□ -1.41
RaraP11416 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RaraP11416 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.26□□□□□ -1.41
RaraP11416 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RaraP11416 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RaraP11416 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.25□□□□□ -1.41
RaraP11416 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.25□□□□□ -1.41
RaraP11416 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RaraP11416 Gm25563-201ENSMUST00000104603 74 ntBASIC6.25□□□□□ -1.41
RaraP11416 Gm13114-201ENSMUST00000117605 106 ntBASIC6.25□□□□□ -1.41
RaraP11416 Gm6893-201ENSMUST00000118385 522 ntBASIC6.25□□□□□ -1.41
RaraP11416 Gm14927-201ENSMUST00000120283 454 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms