Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23211-201ENSMUST00000122717 308 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.77□□□□□ -1.65
Lire1P11260 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.77□□□□□ -1.65
Lire1P11260 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Gm15812-201ENSMUST00000162331 748 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.77□□□□□ -1.65
Lire1P11260 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Mir5103-201ENSMUST00000175111 79 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm27155-201ENSMUST00000183716 898 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm19029-201ENSMUST00000189923 564 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm9173-201ENSMUST00000198054 400 ntBASIC4.77□□□□□ -1.65
Lire1P11260 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm44665-201ENSMUST00000205381 251 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm45523-201ENSMUST00000210712 799 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm6362-201ENSMUST00000217686 836 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm23514-201ENSMUST00000082827 130 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Lire1P11260 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Lire1P11260 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lire1P11260 Gm22778-201ENSMUST00000104090 128 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
Lire1P11260 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm13000-201ENSMUST00000120937 496 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm14126-201ENSMUST00000122345 395 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.76□□□□□ -1.65
Lire1P11260 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Gm16060-201ENSMUST00000153140 478 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm11507-201ENSMUST00000156462 412 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.76□□□□□ -1.65
Lire1P11260 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Gm8941-201ENSMUST00000181451 899 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Gm37492-201ENSMUST00000191948 376 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm37421-201ENSMUST00000193088 132 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm43444-201ENSMUST00000198123 291 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.76□□□□□ -1.65
Lire1P11260 Gm44138-201ENSMUST00000204939 271 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm44583-201ENSMUST00000207478 281 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm40598-201ENSMUST00000222953 547 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.76□□□□□ -1.65
Lire1P11260 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lire1P11260 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lire1P11260 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lire1P11260 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lire1P11260 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lire1P11260 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lire1P11260 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lire1P11260 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.76□□□□□ -1.65
Lire1P11260 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.75□□□□□ -1.65
Lire1P11260 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Mir92b-201ENSMUST00000102300 83 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm11406-201ENSMUST00000117418 484 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm15385-201ENSMUST00000118725 667 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms