Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col1a1P11087 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm10704-201ENSMUST00000098952 730 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Col1a1P11087 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col1a1P11087 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col1a1P11087 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col1a1P11087 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm13785-201ENSMUST00000119099 690 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm14991-201ENSMUST00000119913 598 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm12897-201ENSMUST00000120341 250 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Clec2f-201ENSMUST00000121051 374 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Mir6385-201ENSMUST00000184295 105 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm27190-201ENSMUST00000184890 542 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm37603-201ENSMUST00000192368 219 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm37300-201ENSMUST00000193327 280 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm17781-201ENSMUST00000195232 649 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.93□□□□□ -1.62
Col1a1P11087 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Gm17829-201ENSMUST00000219782 344 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.93□□□□□ -1.62
Col1a1P11087 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col1a1P11087 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col1a1P11087 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Col1a1P11087 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col1a1P11087 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col1a1P11087 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col1a1P11087 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col1a1P11087 Gm15268-201ENSMUST00000118845 352 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm14605-201ENSMUST00000120599 268 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col1a1P11087 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col1a1P11087 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col1a1P11087 Gm19243-201ENSMUST00000198592 269 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm44099-201ENSMUST00000203299 112 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Gm44294-201ENSMUST00000205090 728 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col1a1P11087 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col1a1P11087 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col1a1P11087 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.91□□□□□ -1.62
Col1a1P11087 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col1a1P11087 Gm11432-201ENSMUST00000117334 231 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Gm24314-201ENSMUST00000158274 123 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Gm4644-201ENSMUST00000197587 400 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col1a1P11087 Gm45574-201ENSMUST00000210921 331 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
Col1a1P11087 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.91□□□□□ -1.62
Col1a1P11087 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col1a1P11087 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col1a1P11087 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col1a1P11087 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col1a1P11087 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col1a1P11087 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col1a1P11087 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col1a1P11087 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col1a1P11087 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Gm13268-201ENSMUST00000117485 433 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Gm28830-201ENSMUST00000188192 213 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Gm8023-201ENSMUST00000195298 903 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col1a1P11087 Gm44003-201ENSMUST00000203024 490 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col1a1P11087 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.9□□□□□ -1.62
Col1a1P11087 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.9□□□□□ -1.62
Col1a1P11087 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Col1a1P11087 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Col1a1P11087 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col1a1P11087 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col1a1P11087 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms