Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.21□□□□□ -1.58
Hoxd3P09027 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm24001-201ENSMUST00000158463 85 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Mir6355-201ENSMUST00000183687 106 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm27152-201ENSMUST00000183828 99 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm27507-201ENSMUST00000184199 93 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm8524-201ENSMUST00000186232 379 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm32033-201ENSMUST00000193483 339 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm43048-201ENSMUST00000196101 388 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm7181-201ENSMUST00000202197 434 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm44811-201ENSMUST00000209120 228 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm26130-201ENSMUST00000083171 138 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm23460-201ENSMUST00000083258 109 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm22740-201ENSMUST00000083439 109 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm22284-201ENSMUST00000104132 132 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm11582-201ENSMUST00000121041 236 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm5456-201ENSMUST00000170706 844 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm24812-201ENSMUST00000175315 284 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm20615-201ENSMUST00000177503 705 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm17045-201ENSMUST00000178600 844 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm22633-201ENSMUST00000179834 107 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm19637-201ENSMUST00000185933 579 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm37191-201ENSMUST00000193346 388 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm37477-201ENSMUST00000195215 884 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm18036-201ENSMUST00000195256 272 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm7871-201ENSMUST00000195346 618 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm37029-201ENSMUST00000195773 239 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm43689-201ENSMUST00000195951 427 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm6077-201ENSMUST00000196008 499 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm22897-201ENSMUST00000197860 128 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm5306-201ENSMUST00000203325 757 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm44157-201ENSMUST00000204720 410 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm29785-201ENSMUST00000217033 383 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm26263-201ENSMUST00000083281 164 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hoxd3P09027 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms