Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm13664-201ENSMUST00000117304 345 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14871-201ENSMUST00000119056 194 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm24965-201ENSMUST00000157922 106 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm26001-201ENSMUST00000157989 103 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm23046-201ENSMUST00000158369 284 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm22261-201ENSMUST00000158691 324 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm20428-201ENSMUST00000174365 283 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Mir3572-201ENSMUST00000175549 86 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm26828-201ENSMUST00000180640 172 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm21070-201ENSMUST00000182425 985 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm4859-201ENSMUST00000199625 787 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm8748-201ENSMUST00000211125 587 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm7588-201ENSMUST00000216866 571 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm22741-201ENSMUST00000083438 165 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm9386-201ENSMUST00000095195 381 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Synpr-207ENSMUST00000223583 3362 ntBASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm11408-201ENSMUST00000117889 519 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm11550-201ENSMUST00000118210 699 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm8595-201ENSMUST00000118250 630 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm13557-201ENSMUST00000120771 382 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm11910-201ENSMUST00000121624 432 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm12087-201ENSMUST00000121878 258 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm23585-201ENSMUST00000157656 102 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm23499-201ENSMUST00000157736 268 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Mir1963-201ENSMUST00000158594 59 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm4842-201ENSMUST00000183237 835 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Mir6938-201ENSMUST00000184173 63 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm27427-201ENSMUST00000185134 193 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm21856-201ENSMUST00000187547 696 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm43554-201ENSMUST00000199987 186 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC122332.1-201ENSMUST00000214384 285 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms