Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim3Q9R1R2 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm23594-201ENSMUST00000104307 134 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm23171-201ENSMUST00000157159 264 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm22378-201ENSMUST00000157481 111 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm22588-201ENSMUST00000157510 140 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Rab26os-201ENSMUST00000176215 477 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm4412-201ENSMUST00000186660 433 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm42814-201ENSMUST00000199370 460 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm2522-201ENSMUST00000204280 322 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm43892-201ENSMUST00000204373 265 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm23677-201ENSMUST00000083156 104 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm24031-201ENSMUST00000083930 131 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim3Q9R1R2 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm23608-201ENSMUST00000104545 128 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm11910-201ENSMUST00000121624 432 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm22819-201ENSMUST00000157445 303 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm22968-201ENSMUST00000157955 118 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm3496-201ENSMUST00000188283 745 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm37272-201ENSMUST00000193401 488 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm19096-201ENSMUST00000209705 766 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm7045-201ENSMUST00000221466 605 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms