Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm19761-201ENSMUST00000205372 391 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm25726-201ENSMUST00000104529 129 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm12760-201ENSMUST00000117861 482 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm22514-201ENSMUST00000122547 308 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm24751-201ENSMUST00000157844 102 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm24664-201ENSMUST00000158939 100 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm27044-201ENSMUST00000183033 796 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm27611-201ENSMUST00000184690 108 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Mir6899-201ENSMUST00000184798 64 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm28859-201ENSMUST00000186650 616 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm37881-201ENSMUST00000193001 421 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm43370-201ENSMUST00000196437 284 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm44690-201ENSMUST00000207984 382 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm10916-201ENSMUST00000080330 483 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdc40Q9DC48 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm23465-201ENSMUST00000157134 262 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm20701-201ENSMUST00000176082 347 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm18462-201ENSMUST00000208112 417 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm4057-201ENSMUST00000221407 368 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms