Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm13250-201ENSMUST00000117209 753 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm15385-201ENSMUST00000118725 667 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm11631-201ENSMUST00000119220 156 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm13902-201ENSMUST00000120168 605 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm12587-201ENSMUST00000120180 427 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm11909-201ENSMUST00000121424 759 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm11575-201ENSMUST00000122243 228 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm23792-201ENSMUST00000122557 93 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm24628-201ENSMUST00000122761 289 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm25714-201ENSMUST00000158626 296 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm17194-201ENSMUST00000164610 348 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm9687-201ENSMUST00000189312 602 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm28788-201ENSMUST00000189717 375 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm29558-201ENSMUST00000190134 375 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm8891-201ENSMUST00000198546 832 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm44402-201ENSMUST00000203677 238 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm44816-201ENSMUST00000206666 477 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm10297-201ENSMUST00000207136 651 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm9373-201ENSMUST00000208724 599 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm22019-201ENSMUST00000104359 96 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm12379-201ENSMUST00000119607 391 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm12734-201ENSMUST00000120228 948 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm15905-201ENSMUST00000137042 298 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm24402-201ENSMUST00000157873 91 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm3053-201ENSMUST00000161709 616 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm8614-201ENSMUST00000182528 978 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm29556-201ENSMUST00000187591 696 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm37682-201ENSMUST00000191776 522 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm37243-201ENSMUST00000193407 595 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm44485-201ENSMUST00000199569 137 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm43309-201ENSMUST00000200837 458 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm44952-201ENSMUST00000204443 433 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Vps28Q9D1C8 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms