Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm16362-201ENSMUST00000135189 214 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm25152-201ENSMUST00000157117 114 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm16134-201ENSMUST00000161714 336 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm3111-201ENSMUST00000167426 490 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm27820-201ENSMUST00000183628 175 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm27849-201ENSMUST00000183673 125 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Mir7222-201ENSMUST00000183740 75 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm27964-201ENSMUST00000185195 62 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm18177-201ENSMUST00000188373 404 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm28640-201ENSMUST00000190918 550 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm37341-201ENSMUST00000194680 371 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm9480-201ENSMUST00000198038 616 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm43315-201ENSMUST00000198120 313 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm42579-201ENSMUST00000200512 734 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm9269-201ENSMUST00000221661 578 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.72□□□□□ -1.49
RpainQ9CWY9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RpainQ9CWY9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RpainQ9CWY9 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RpainQ9CWY9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.71□□□□□ -1.49
RpainQ9CWY9 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.71□□□□□ -1.49
RpainQ9CWY9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RpainQ9CWY9 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.71□□□□□ -1.49
RpainQ9CWY9 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RpainQ9CWY9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RpainQ9CWY9 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm12901-201ENSMUST00000118690 532 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm16423-201ENSMUST00000120078 947 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm11965-201ENSMUST00000122017 277 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm11692-201ENSMUST00000122121 902 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm16274-201ENSMUST00000139251 592 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm23591-201ENSMUST00000157663 286 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm17060-201ENSMUST00000172394 824 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm3454-201ENSMUST00000185571 412 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Mir219c-201ENSMUST00000199860 60 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm19457-201ENSMUST00000200995 448 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm8999-201ENSMUST00000204951 969 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm45422-201ENSMUST00000211476 246 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm6056-201ENSMUST00000221253 488 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm5185-201ENSMUST00000080271 619 ntBASIC5.71□□□□□ -1.5
RpainQ9CWY9 Gm23242-201ENSMUST00000083055 107 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms