Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm28700-201ENSMUST00000187614 579 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm36984-201ENSMUST00000192770 235 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm43541-201ENSMUST00000197208 581 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm45249-201ENSMUST00000211021 348 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.33□□□□□ -1.4
Clp1Q99LI9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clp1Q99LI9 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Mir1188-201ENSMUST00000116756 120 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm15175-201ENSMUST00000117629 132 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm11859-201ENSMUST00000118099 455 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm7927-201ENSMUST00000118818 880 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm13503-201ENSMUST00000119017 446 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm13804-201ENSMUST00000119552 172 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm7071-201ENSMUST00000120458 462 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm12488-201ENSMUST00000122449 499 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm24635-201ENSMUST00000122712 128 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm25826-201ENSMUST00000157090 137 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm16134-201ENSMUST00000161714 336 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm24407-201ENSMUST00000177864 141 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm21171-201ENSMUST00000180048 673 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm24306-201ENSMUST00000180229 79 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm37889-201ENSMUST00000194174 251 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm42828-201ENSMUST00000199669 469 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 AL669916.3-201ENSMUST00000213855 94 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 AL669916.6-201ENSMUST00000214610 94 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 AL669916.4-201ENSMUST00000215976 94 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 AL669916.1-201ENSMUST00000217640 94 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm6474-201ENSMUST00000223250 699 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm8288-201ENSMUST00000223406 593 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm25126-201ENSMUST00000083343 102 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm18180-201ENSMUST00000187562 1484 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.32□□□□□ -1.4
Clp1Q99LI9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.32□□□□□ -1.4
Clp1Q99LI9 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms