Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm14529-201ENSMUST00000117894 406 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm6744-201ENSMUST00000119303 543 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm5401-201ENSMUST00000122444 365 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm17121-201ENSMUST00000170414 847 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm17222-201ENSMUST00000180135 847 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm6055-201ENSMUST00000180532 378 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Mir6952-201ENSMUST00000185092 61 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm31211-201ENSMUST00000199170 253 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm43501-201ENSMUST00000202513 107 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm44134-202ENSMUST00000204777 545 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm7802-201ENSMUST00000216464 262 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm31849-201ENSMUST00000220306 375 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm18592-201ENSMUST00000221529 276 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 CT010506.2-201ENSMUST00000225618 183 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC134420.1-201ENSMUST00000227027 289 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Rny1-201ENSMUST00000083767 112 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.77□□□□□ -1.32
Trim47Q8C0E3 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.77□□□□□ -1.32
Trim47Q8C0E3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm12805-201ENSMUST00000117305 1048 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm13804-201ENSMUST00000119552 172 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm12308-201ENSMUST00000120440 389 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm15838-201ENSMUST00000161575 180 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm3076-201ENSMUST00000161613 451 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm21399-201ENSMUST00000180210 597 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm27004-201ENSMUST00000183300 727 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Mir6992-201ENSMUST00000183342 109 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm20162-201ENSMUST00000193629 871 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm37495-201ENSMUST00000194590 264 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm42475-201ENSMUST00000201212 295 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm8785-201ENSMUST00000220259 487 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 CT030187.1-201ENSMUST00000220605 252 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm9237-201ENSMUST00000221499 548 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm24319-201ENSMUST00000083389 107 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.77□□□□□ -1.33
Trim47Q8C0E3 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms