Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm15212-201ENSMUST00000122403 466 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm23959-201ENSMUST00000157208 324 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm22601-201ENSMUST00000157595 250 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm23499-201ENSMUST00000157736 268 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm23046-201ENSMUST00000158369 284 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm18985-201ENSMUST00000196472 1079 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm43005-201ENSMUST00000199015 648 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm2522-201ENSMUST00000204280 322 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm22423-201ENSMUST00000082861 184 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc40Q8BI79 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm14909-201ENSMUST00000117853 351 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm4342-201ENSMUST00000118982 367 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm13557-201ENSMUST00000120771 382 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm14695-201ENSMUST00000121721 282 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm11759-201ENSMUST00000121742 464 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm7846-201ENSMUST00000145844 274 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm25383-201ENSMUST00000157810 144 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm23781-201ENSMUST00000157940 308 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm5558-201ENSMUST00000178933 495 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm26828-201ENSMUST00000180640 172 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm18387-201ENSMUST00000220333 702 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm6065-201ENSMUST00000081336 492 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Snord15b-201ENSMUST00000083032 145 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm6043-201ENSMUST00000099961 492 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc40Q8BI79 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms