Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim56Q80VI1 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.47□□□□□ -1.37
Trim56Q80VI1 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim56Q80VI1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim56Q80VI1 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim56Q80VI1 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.37
Trim56Q80VI1 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Trim56Q80VI1 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.46□□□□□ -1.37
Trim56Q80VI1 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim56Q80VI1 Gm26067-201ENSMUST00000103789 110 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm24430-201ENSMUST00000104077 104 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm12016-201ENSMUST00000119079 681 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm9498-201ENSMUST00000140849 291 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm22596-201ENSMUST00000157601 316 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm24295-201ENSMUST00000158298 131 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm5929-201ENSMUST00000166883 487 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm29159-201ENSMUST00000187969 379 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Mir6516-201ENSMUST00000196236 110 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm19074-201ENSMUST00000218915 1429 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm7099-201ENSMUST00000080066 554 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm8724-201ENSMUST00000081668 483 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Gm23511-201ENSMUST00000083084 164 ntBASIC6.46□□□□□ -1.38
Trim56Q80VI1 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim56Q80VI1 Naip3-201ENSMUST00000118082 4208 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm8475-201ENSMUST00000118211 526 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm8595-201ENSMUST00000118250 630 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm11481-201ENSMUST00000120069 255 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm7916-201ENSMUST00000120325 456 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm22214-201ENSMUST00000157563 172 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm22076-201ENSMUST00000158601 84 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm27266-201ENSMUST00000184521 123 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm27588-201ENSMUST00000185096 263 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm42805-201ENSMUST00000196158 276 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm6543-201ENSMUST00000197353 808 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm4012-201ENSMUST00000221504 581 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.45□□□□□ -1.38
Trim56Q80VI1 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms