Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43026-201ENSMUST00000202972 325 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44794-201ENSMUST00000206550 411 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm4501-201ENSMUST00000207330 551 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm4558-201ENSMUST00000207886 521 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm4528-201ENSMUST00000207905 551 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45530-201ENSMUST00000211658 225 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22019-201ENSMUST00000104359 96 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22372-201ENSMUST00000104589 136 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13811-201ENSMUST00000117800 256 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11878-201ENSMUST00000117908 400 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm16074-201ENSMUST00000119524 444 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm8430-201ENSMUST00000119780 471 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13991-201ENSMUST00000120190 648 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm12267-201ENSMUST00000121609 761 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23539-201ENSMUST00000157537 224 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6541-201ENSMUST00000165542 561 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24561-201ENSMUST00000175182 95 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Mir6971-201ENSMUST00000183497 63 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Mir7020-201ENSMUST00000183787 70 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm17934-201ENSMUST00000192818 422 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6631-201ENSMUST00000193699 559 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm3933-201ENSMUST00000195391 439 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42437-201ENSMUST00000197263 923 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm2436-201ENSMUST00000219562 774 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sh3rf1Q69ZI1 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13439-201ENSMUST00000117541 409 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6923-201ENSMUST00000118343 406 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11761-201ENSMUST00000121392 445 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm15959-201ENSMUST00000121724 368 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm26256-201ENSMUST00000122499 186 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms