Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm22968-201ENSMUST00000157955 118 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Mir1947-201ENSMUST00000158235 85 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm24939-201ENSMUST00000158325 137 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm29228-201ENSMUST00000185489 418 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm29097-201ENSMUST00000190273 422 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm18320-201ENSMUST00000211304 595 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm23510-201ENSMUST00000083083 163 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm26367-201ENSMUST00000104165 132 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm13755-201ENSMUST00000118509 305 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm11398-201ENSMUST00000120330 320 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm10444-201ENSMUST00000126708 148 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm23743-201ENSMUST00000157389 274 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm6155-201ENSMUST00000173735 341 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm22859-201ENSMUST00000174978 122 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm13249-201ENSMUST00000177803 345 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm13144-201ENSMUST00000179385 345 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm37670-201ENSMUST00000193622 229 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm44543-201ENSMUST00000209136 396 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm19134-201ENSMUST00000221203 487 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.62□□□□□ -1.67
Upf3bQ3ULL6 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm22778-201ENSMUST00000104090 128 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm14385-201ENSMUST00000116315 876 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm14304-201ENSMUST00000117272 446 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm4487-201ENSMUST00000150617 442 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm24224-201ENSMUST00000158828 258 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm27875-201ENSMUST00000184425 123 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm27414-201ENSMUST00000185033 381 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm8861-201ENSMUST00000196346 832 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm42566-201ENSMUST00000197120 643 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm19073-201ENSMUST00000219978 555 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm6195-201ENSMUST00000063059 357 ntBASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3bQ3ULL6 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms