Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm5777-201ENSMUST00000177265 448 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Mir7012-201ENSMUST00000183900 64 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm27492-201ENSMUST00000185194 187 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm38166-201ENSMUST00000191660 471 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm10292-202ENSMUST00000193165 585 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Trav12-4-201ENSMUST00000200663 271 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm43945-201ENSMUST00000203595 754 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm43992-201ENSMUST00000204358 197 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm45409-201ENSMUST00000211486 252 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 CT573422.1-201ENSMUST00000216655 405 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm6056-201ENSMUST00000221253 488 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm7117-201ENSMUST00000071515 387 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm26163-201ENSMUST00000083792 178 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf2Q3UAW9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm12423-201ENSMUST00000118334 135 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm15193-201ENSMUST00000120224 865 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm13787-201ENSMUST00000120422 168 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm11804-201ENSMUST00000121663 468 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm14907-201ENSMUST00000121948 854 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm7855-201ENSMUST00000137737 687 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm23121-201ENSMUST00000157653 173 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm3030-201ENSMUST00000163410 516 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm3339-201ENSMUST00000163462 475 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm17060-201ENSMUST00000172394 824 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm25944-201ENSMUST00000178758 94 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm2092-201ENSMUST00000178887 639 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm2759-201ENSMUST00000179938 639 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 V1rg10-201ENSMUST00000183378 937 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Mir6343-201ENSMUST00000183584 84 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm37418-201ENSMUST00000195031 274 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm42516-201ENSMUST00000198691 767 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm43794-201ENSMUST00000200971 692 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm42666-201ENSMUST00000201954 152 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm7825-201ENSMUST00000204046 416 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm32536-201ENSMUST00000205209 445 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm9512-201ENSMUST00000223112 497 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf2Q3UAW9 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Brf2Q3UAW9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Brf2Q3UAW9 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
Brf2Q3UAW9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Brf2Q3UAW9 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Brf2Q3UAW9 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.58□□□□□ -1.68
Brf2Q3UAW9 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms