Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Rnu11-201ENSMUST00000104135 134 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm15981-201ENSMUST00000119196 457 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm12231-201ENSMUST00000119447 695 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm6062-201ENSMUST00000120462 631 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm7670-201ENSMUST00000121272 641 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm25224-201ENSMUST00000158195 68 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm22116-201ENSMUST00000158791 141 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm19840-201ENSMUST00000169624 882 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm17907-201ENSMUST00000173150 710 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm25065-201ENSMUST00000177914 132 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm17045-201ENSMUST00000178600 844 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm25361-201ENSMUST00000179358 76 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm25891-201ENSMUST00000180050 132 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm37681-201ENSMUST00000193880 727 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm37801-201ENSMUST00000194754 274 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm2996-201ENSMUST00000211398 537 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 AC113031.4-201ENSMUST00000228381 514 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.72□□□□□ -1.33
Col9a1Q05722 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col9a1Q05722 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col9a1Q05722 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.71□□□□□ -1.33
Col9a1Q05722 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Col9a1Q05722 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.71□□□□□ -1.33
Col9a1Q05722 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col9a1Q05722 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col9a1Q05722 AC129085.3-201ENSMUST00000225686 1705 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm26376-201ENSMUST00000104784 110 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm12509-201ENSMUST00000118033 609 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm13511-201ENSMUST00000121167 363 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm25152-201ENSMUST00000157117 114 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm23120-201ENSMUST00000157654 287 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm22891-201ENSMUST00000158641 164 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm16164-201ENSMUST00000160078 468 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col9a1Q05722 Mir3104-201ENSMUST00000174911 63 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Mir3095-201ENSMUST00000175552 87 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm24100-201ENSMUST00000178592 79 ntBASIC6.71□□□□□ -1.34
Col9a1Q05722 Gm24137-201ENSMUST00000180055 79 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms