Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm23614-201ENSMUST00000082598 107 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm336-201ENSMUST00000186376 1480 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm14352-201ENSMUST00000119250 449 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm13603-201ENSMUST00000119404 83 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm4234-201ENSMUST00000119747 714 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Snora81-201ENSMUST00000157310 178 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm27820-201ENSMUST00000183628 175 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm42465-201ENSMUST00000197036 492 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm12582-201ENSMUST00000030555 697 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm23846-201ENSMUST00000083835 107 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col6a1Q04857 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a1Q04857 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.3□□□□□ -1.4
Col6a1Q04857 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm25111-201ENSMUST00000116686 147 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm12370-201ENSMUST00000117809 604 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm11322-201ENSMUST00000118095 435 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm7927-201ENSMUST00000118818 880 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm16445-201ENSMUST00000120399 714 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm5646-201ENSMUST00000120568 714 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm22480-201ENSMUST00000122568 128 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm17054-201ENSMUST00000169811 259 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm15143-201ENSMUST00000178180 714 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm37341-201ENSMUST00000194680 371 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm2077-201ENSMUST00000195017 319 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm43856-201ENSMUST00000197004 369 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm42663-201ENSMUST00000199883 351 ntBASIC6.29□□□□□ -1.4
Col6a1Q04857 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.29□□□□□ -1.4
Col6a1Q04857 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms