Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm17223-201ENSMUST00000171413 481 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm23619-201ENSMUST00000178411 94 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm25474-201ENSMUST00000179052 94 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm22047-201ENSMUST00000179176 94 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm27820-201ENSMUST00000183628 175 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm18342-201ENSMUST00000186987 694 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm29556-201ENSMUST00000187591 696 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm2427-201ENSMUST00000189121 881 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm3690-201ENSMUST00000211341 262 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm18618-201ENSMUST00000222211 473 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col8a1Q00780 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Mir342-201ENSMUST00000083502 99 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm23846-201ENSMUST00000083835 107 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm37076-201ENSMUST00000192033 2294 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm45117-201ENSMUST00000207250 1774 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm22499-201ENSMUST00000104501 135 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm13650-201ENSMUST00000117729 433 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm15399-201ENSMUST00000118055 724 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm14172-201ENSMUST00000118255 644 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm4989-201ENSMUST00000118711 749 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm13259-201ENSMUST00000120792 456 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm7855-201ENSMUST00000137737 687 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm22235-201ENSMUST00000157085 110 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm25826-201ENSMUST00000157090 137 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm25655-201ENSMUST00000158465 290 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm22242-201ENSMUST00000175224 118 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm23977-201ENSMUST00000177871 74 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm26925-201ENSMUST00000182470 957 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm27855-201ENSMUST00000184122 128 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm28615-201ENSMUST00000187527 482 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm29160-201ENSMUST00000190094 699 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm44373-201ENSMUST00000196112 169 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm44055-201ENSMUST00000204376 247 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm6070-201ENSMUST00000207275 419 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm6929-201ENSMUST00000210930 468 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm45789-201ENSMUST00000213038 364 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 Gm7530-201ENSMUST00000218466 605 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC122465.3-201ENSMUST00000221644 355 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.97□□□□□ -1.61
Col8a1Q00780 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms