Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Gm22115-201ENSMUST00000103976 133 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm23923-201ENSMUST00000104108 133 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm24831-201ENSMUST00000116778 126 ntBASIC4.95□□□□□ -1.62
NcanP55066 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NcanP55066 Gm14991-201ENSMUST00000119913 598 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm11866-201ENSMUST00000120209 335 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm15780-201ENSMUST00000121283 935 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm14840-201ENSMUST00000122135 594 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Gm25264-201ENSMUST00000158519 117 ntBASIC4.95□□□□□ -1.62
NcanP55066 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Spin2g-201ENSMUST00000178425 687 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Gm18747-201ENSMUST00000198129 648 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm43922-201ENSMUST00000205071 328 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.95□□□□□ -1.62
NcanP55066 Gm45458-201ENSMUST00000209900 522 ntBASIC4.95□□□□□ -1.62
NcanP55066 Gm18255-201ENSMUST00000211316 765 ntBASIC4.95□□□□□ -1.62
NcanP55066 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.95□□□□□ -1.62
NcanP55066 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NcanP55066 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.95□□□□□ -1.62
NcanP55066 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NcanP55066 Gm6043-201ENSMUST00000099961 492 ntBASIC4.95□□□□□ -1.62
NcanP55066 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NcanP55066 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NcanP55066 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NcanP55066 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.95□□□□□ -1.62
NcanP55066 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NcanP55066 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
NcanP55066 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NcanP55066 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.94□□□□□ -1.62
NcanP55066 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
NcanP55066 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Zfp389-201ENSMUST00000118425 675 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NcanP55066 Gm7350-201ENSMUST00000120964 636 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm9003-201ENSMUST00000121810 482 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Mir8090-201ENSMUST00000185078 136 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm21742-201ENSMUST00000189352 548 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm44354-201ENSMUST00000196017 143 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm8069-201ENSMUST00000197887 154 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm5885-202ENSMUST00000203357 528 ntBASIC4.94□□□□□ -1.62
NcanP55066 Gm43974-201ENSMUST00000205080 684 ntBASIC4.94□□□□□ -1.62
NcanP55066 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 BC023105-201ENSMUST00000073997 1227 ntBASIC4.94□□□□□ -1.62
NcanP55066 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NcanP55066 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NcanP55066 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NcanP55066 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.94□□□□□ -1.62
NcanP55066 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NcanP55066 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NcanP55066 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.94□□□□□ -1.62
NcanP55066 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NcanP55066 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
NcanP55066 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NcanP55066 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NcanP55066 Gm13815-201ENSMUST00000119963 412 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm13118-201ENSMUST00000120402 549 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm3160-201ENSMUST00000128343 607 ntBASIC4.93□□□□□ -1.62
NcanP55066 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.93□□□□□ -1.62
NcanP55066 Gm23098-201ENSMUST00000157552 299 ntBASIC4.93□□□□□ -1.62
NcanP55066 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 Gm22923-201ENSMUST00000174952 110 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm28614-201ENSMUST00000186483 458 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm28148-201ENSMUST00000186924 697 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.93□□□□□ -1.62
NcanP55066 Gm37164-201ENSMUST00000192809 637 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm8790-201ENSMUST00000194108 322 ntBASIC4.93□□□□□ -1.62
NcanP55066 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NcanP55066 Gm42579-201ENSMUST00000200512 734 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.93□□□□□ -1.62
NcanP55066 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NcanP55066 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.93□□□□□ -1.62
NcanP55066 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.93□□□□□ -1.62
NcanP55066 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.93□□□□□ -1.62
NcanP55066 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.93□□□□□ -1.62
NcanP55066 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
NcanP55066 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms