Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.36□□□□□ -1.71
Sox3P53784 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sox3P53784 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.36□□□□□ -1.71
Sox3P53784 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sox3P53784 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sox3P53784 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Sox3P53784 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sox3P53784 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sox3P53784 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox3P53784 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Fus-202ENSMUST00000079045 2623 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm14885-201ENSMUST00000117969 496 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm12638-201ENSMUST00000119531 298 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm6071-201ENSMUST00000119561 440 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm9435-201ENSMUST00000120379 877 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm13487-201ENSMUST00000122240 864 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Gm23781-201ENSMUST00000157940 308 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm11394-201ENSMUST00000181421 517 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Gm30280-201ENSMUST00000192214 262 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm7449-201ENSMUST00000194393 663 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm19201-201ENSMUST00000210127 778 ntBASIC4.35□□□□□ -1.71
Sox3P53784 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox3P53784 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.35□□□□□ -1.71
Sox3P53784 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Sox3P53784 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Sox3P53784 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox3P53784 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sox3P53784 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.34□□□□□ -1.71
Sox3P53784 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox3P53784 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.34□□□□□ -1.71
Sox3P53784 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.34□□□□□ -1.71
Sox3P53784 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Gm25169-201ENSMUST00000104190 129 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Gm13755-201ENSMUST00000118509 305 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm9208-201ENSMUST00000120468 948 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm22986-201ENSMUST00000122753 130 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.34□□□□□ -1.71
Sox3P53784 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.34□□□□□ -1.71
Sox3P53784 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.34□□□□□ -1.71
Sox3P53784 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm16558-201ENSMUST00000163015 532 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Mir713-201ENSMUST00000178651 108 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm16378-201ENSMUST00000179168 342 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Sox3P53784 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm44779-201ENSMUST00000206937 708 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm45523-201ENSMUST00000210712 799 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm21112-201ENSMUST00000212224 578 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm7760-201ENSMUST00000212265 578 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm7807-201ENSMUST00000212475 578 ntBASIC4.34□□□□□ -1.71
Sox3P53784 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.34□□□□□ -1.71
Sox3P53784 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.34□□□□□ -1.71
Sox3P53784 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sox3P53784 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sox3P53784 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sox3P53784 Gm10042-201ENSMUST00000079884 78 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm26165-201ENSMUST00000083791 138 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Gm6177-201ENSMUST00000085589 465 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox3P53784 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC4.34□□□□□ -1.71
Sox3P53784 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Sox3P53784 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox3P53784 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.34□□□□□ -1.72
Sox3P53784 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Sox3P53784 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Sox3P53784 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms