Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37416-201ENSMUST00000193596 318 ntBASIC6.46□□□□□ -1.37
Cux1P53564 CT030662.2-201ENSMUST00000226942 805 ntBASIC6.46□□□□□ -1.37
Cux1P53564 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC6.46□□□□□ -1.38
Cux1P53564 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cux1P53564 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cux1P53564 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Gm6071-201ENSMUST00000119561 440 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm15364-201ENSMUST00000119618 585 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Mir713-201ENSMUST00000178651 108 ntBASIC6.45□□□□□ -1.38
Cux1P53564 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Gm36998-201ENSMUST00000193205 704 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm42983-201ENSMUST00000199879 815 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm44765-201ENSMUST00000206927 601 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm45845-201ENSMUST00000207326 582 ntBASIC6.45□□□□□ -1.38
Cux1P53564 AC158807.1-201ENSMUST00000217959 187 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm17829-201ENSMUST00000219782 344 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm4036-201ENSMUST00000220842 626 ntBASIC6.45□□□□□ -1.38
Cux1P53564 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.45□□□□□ -1.38
Cux1P53564 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm8288-201ENSMUST00000223406 593 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Cux1P53564 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cux1P53564 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cux1P53564 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 Gm15553-201ENSMUST00000118757 430 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm17781-201ENSMUST00000195232 649 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Gm44294-201ENSMUST00000205090 728 ntBASIC6.45□□□□□ -1.38
Cux1P53564 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cux1P53564 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.45□□□□□ -1.38
Cux1P53564 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.45□□□□□ -1.38
Cux1P53564 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cux1P53564 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cux1P53564 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cux1P53564 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cux1P53564 Gm14845-201ENSMUST00000121259 306 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm7618-201ENSMUST00000121643 171 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm23964-201ENSMUST00000157966 107 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm37241-201ENSMUST00000191736 523 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm37097-201ENSMUST00000193676 336 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm43586-201ENSMUST00000195948 310 ntBASIC6.44□□□□□ -1.38
Cux1P53564 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm8132-201ENSMUST00000204938 640 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm272-201ENSMUST00000222073 919 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cux1P53564 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cux1P53564 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cux1P53564 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cux1P53564 Gm45555-201ENSMUST00000210028 2602 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gm13615-201ENSMUST00000120242 1612 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cux1P53564 Gm45378-201ENSMUST00000211063 2711 ntBASIC6.44□□□□□ -1.38
Cux1P53564 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cux1P53564 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cux1P53564 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cux1P53564 Gm25833-201ENSMUST00000104137 133 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Gm12931-201ENSMUST00000117046 324 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Gm23198-201ENSMUST00000158811 91 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Mir6408-201ENSMUST00000183643 91 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Gm43730-201ENSMUST00000199863 372 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Gm19908-201ENSMUST00000204684 391 ntBASIC6.43□□□□□ -1.38
Cux1P53564 AC124524.2-201ENSMUST00000223940 588 ntBASIC6.43□□□□□ -1.38
Cux1P53564 n-R5s166-201ENSMUST00000082898 121 ntBASIC6.43□□□□□ -1.38
Cux1P53564 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cux1P53564 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cux1P53564 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cux1P53564 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cux1P53564 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Cux1P53564 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Cux1P53564 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cux1P53564 Gm25765-201ENSMUST00000104100 132 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Gm24982-201ENSMUST00000104456 132 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.42□□□□□ -1.38
Cux1P53564 Gm24553-201ENSMUST00000158653 131 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC6.42□□□□□ -1.38
Cux1P53564 Gm2314-201ENSMUST00000200391 586 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Gm6171-201ENSMUST00000220760 645 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Mir202-201ENSMUST00000083568 72 ntBASIC6.42□□□□□ -1.38
Cux1P53564 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cux1P53564 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cux1P53564 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cux1P53564 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cux1P53564 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cux1P53564 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC6.41□□□□□ -1.38
Cux1P53564 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cux1P53564 Gm12335-201ENSMUST00000119738 327 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms