Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm11699-201ENSMUST00000119016 401 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm14018-201ENSMUST00000119042 455 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm13013-201ENSMUST00000119087 523 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm12732-201ENSMUST00000121688 180 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm26170-201ENSMUST00000158419 148 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm22261-201ENSMUST00000158691 324 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm18006-201ENSMUST00000177411 662 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Mir6401-201ENSMUST00000184499 109 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm38040-201ENSMUST00000193505 225 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm32526-201ENSMUST00000221878 981 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm24032-201ENSMUST00000083932 159 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx1P48377 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm14918-201ENSMUST00000118153 268 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm22452-201ENSMUST00000122804 104 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm16164-201ENSMUST00000160078 468 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm23648-201ENSMUST00000180301 107 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Mir6541-201ENSMUST00000183649 110 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm17946-201ENSMUST00000186856 538 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm19777-201ENSMUST00000191940 358 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.72□□□□□ -1.33
Rfx1P48377 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm44463-201ENSMUST00000198895 137 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm45673-201ENSMUST00000210293 358 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm45870-201ENSMUST00000211269 601 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm8911-201ENSMUST00000213986 652 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm31931-201ENSMUST00000219666 222 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm4921-201ENSMUST00000219804 992 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm18247-201ENSMUST00000222937 601 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx1P48377 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx1P48377 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx1P48377 Gm23506-201ENSMUST00000083077 107 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Gm22829-201ENSMUST00000083771 106 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Rfx1P48377 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.72□□□□□ -1.33
Rfx1P48377 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx1P48377 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx1P48377 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Rfx1P48377 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms