Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25410-201ENSMUST00000083758 137 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm44321-201ENSMUST00000204262 2855 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm11859-201ENSMUST00000118099 455 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm15094-201ENSMUST00000118394 1131 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm14845-201ENSMUST00000121259 306 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm24931-201ENSMUST00000158324 107 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm17152-201ENSMUST00000172430 535 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm28700-201ENSMUST00000187614 579 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm43405-201ENSMUST00000198642 337 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm4734-201ENSMUST00000200117 777 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm4501-201ENSMUST00000207330 551 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm4574-201ENSMUST00000207804 542 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Gm4558-201ENSMUST00000207886 521 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm19921-201ENSMUST00000210505 703 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Mir383-201ENSMUST00000083523 70 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm43870-201ENSMUST00000205102 4369 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col18a1P39061 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.55□□□□□ -1.36
Col18a1P39061 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm26075-201ENSMUST00000104062 121 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm22339-201ENSMUST00000157718 62 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm25284-201ENSMUST00000180345 141 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm38050-201ENSMUST00000191904 238 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm38075-201ENSMUST00000191979 920 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm38041-201ENSMUST00000194445 661 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm5034-201ENSMUST00000199115 634 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm8556-201ENSMUST00000210437 664 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 AC154358.1-201ENSMUST00000224871 218 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm37099-201ENSMUST00000191902 3451 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm38374-201ENSMUST00000194417 2033 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm13614-201ENSMUST00000117306 503 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm14560-201ENSMUST00000118672 375 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm16463-201ENSMUST00000120527 721 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm2182-201ENSMUST00000145243 663 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm21171-201ENSMUST00000180048 673 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm7449-201ENSMUST00000194393 663 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Gm42581-201ENSMUST00000201774 966 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.54□□□□□ -1.36
Col18a1P39061 AC116726.2-201ENSMUST00000217629 986 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col18a1P39061 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col18a1P39061 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms