Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm23883-201ENSMUST00000122686 290 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp4P35123 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp4P35123 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm9457-201ENSMUST00000180176 372 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm18177-201ENSMUST00000188373 404 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm18969-201ENSMUST00000189423 730 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp4P35123 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp4P35123 Gm38109-201ENSMUST00000195386 181 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm43224-201ENSMUST00000201567 898 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Gm18482-201ENSMUST00000202405 760 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.68□□□□□ -1.5
Usp4P35123 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.68□□□□□ -1.5
Usp4P35123 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.68□□□□□ -1.5
Usp4P35123 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.68□□□□□ -1.5
Usp4P35123 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp4P35123 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp4P35123 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp4P35123 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp4P35123 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Usp4P35123 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.68□□□□□ -1.5
Usp4P35123 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp4P35123 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp4P35123 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp4P35123 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm26002-201ENSMUST00000101915 107 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm26078-201ENSMUST00000104067 128 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm14725-201ENSMUST00000120324 828 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm13077-201ENSMUST00000121941 484 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm13214-201ENSMUST00000122137 408 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm13131-201ENSMUST00000122228 321 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm23792-201ENSMUST00000122557 93 ntBASIC5.67□□□□□ -1.5
Usp4P35123 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm26489-201ENSMUST00000157880 264 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm26086-201ENSMUST00000157902 263 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm26173-201ENSMUST00000158416 136 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm22836-201ENSMUST00000158441 61 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm22116-201ENSMUST00000158791 141 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm22326-201ENSMUST00000158897 351 ntBASIC5.67□□□□□ -1.5
Usp4P35123 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm23269-201ENSMUST00000178701 107 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm28343-201ENSMUST00000185386 112 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.67□□□□□ -1.5
Usp4P35123 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 Mir142-201ENSMUST00000198092 64 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Mir219c-201ENSMUST00000199860 60 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm2314-201ENSMUST00000200391 586 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm8719-201ENSMUST00000203602 534 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.67□□□□□ -1.5
Usp4P35123 Gm18774-201ENSMUST00000218269 601 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gm5176-202ENSMUST00000220267 583 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp4P35123 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp4P35123 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.67□□□□□ -1.5
Usp4P35123 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.67□□□□□ -1.5
Usp4P35123 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp4P35123 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp4P35123 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms