Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col1a1P11087 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 Gm24987-201ENSMUST00000104453 134 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm8129-201ENSMUST00000118230 213 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.96□□□□□ -1.62
Col1a1P11087 Spin2g-201ENSMUST00000178425 687 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Col1a1P11087 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 Gm18120-201ENSMUST00000220079 511 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col1a1P11087 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col1a1P11087 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col1a1P11087 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col1a1P11087 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 Gm37611-201ENSMUST00000195250 2028 ntBASIC4.96□□□□□ -1.62
Col1a1P11087 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col1a1P11087 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col1a1P11087 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm24048-201ENSMUST00000102411 106 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm12931-201ENSMUST00000117046 324 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm11393-201ENSMUST00000118019 288 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm23082-201ENSMUST00000157852 133 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm16290-201ENSMUST00000161175 474 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm43649-201ENSMUST00000196596 391 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm42451-201ENSMUST00000197410 244 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm43424-201ENSMUST00000200484 253 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC4.95□□□□□ -1.62
Col1a1P11087 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm5265-201ENSMUST00000076828 342 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col1a1P11087 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col1a1P11087 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col1a1P11087 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col1a1P11087 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col1a1P11087 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.95□□□□□ -1.62
Col1a1P11087 Gm23133-201ENSMUST00000104255 135 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm15783-201ENSMUST00000117521 633 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm12885-201ENSMUST00000122246 328 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm22958-201ENSMUST00000122512 184 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm25290-201ENSMUST00000122796 144 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm23865-201ENSMUST00000157723 97 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm27457-201ENSMUST00000184771 156 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Mir7062-201ENSMUST00000185038 66 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm29634-201ENSMUST00000188467 696 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm28699-201ENSMUST00000189193 696 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col1a1P11087 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm20276-201ENSMUST00000216122 2648 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm22857-201ENSMUST00000174969 134 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm4322-201ENSMUST00000191094 336 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm42983-201ENSMUST00000199879 815 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.94□□□□□ -1.62
Col1a1P11087 Gm7380-201ENSMUST00000211599 466 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.94□□□□□ -1.62
Col1a1P11087 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 Gm272-201ENSMUST00000222073 919 ntBASIC4.94□□□□□ -1.62
Col1a1P11087 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms