Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Mir674-201ENSMUST00000102421 100 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm23836-201ENSMUST00000104434 129 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm13250-201ENSMUST00000117209 753 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm12842-201ENSMUST00000117298 476 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm13009-201ENSMUST00000121307 267 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm12369-201ENSMUST00000121343 942 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm25722-201ENSMUST00000157498 279 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm23277-201ENSMUST00000157914 136 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm23891-201ENSMUST00000158114 138 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm19840-201ENSMUST00000169624 882 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Mir3964-201ENSMUST00000174898 74 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Mir5617-201ENSMUST00000176786 57 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm20660-201ENSMUST00000177515 289 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm26731-201ENSMUST00000180683 543 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm27299-201ENSMUST00000184593 103 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm27490-201ENSMUST00000184754 128 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm27804-201ENSMUST00000185135 119 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm18964-201ENSMUST00000193013 563 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm37689-201ENSMUST00000193139 275 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm42708-201ENSMUST00000196332 905 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm19761-201ENSMUST00000205372 391 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm45032-201ENSMUST00000205375 520 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm45005-201ENSMUST00000206640 157 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm44543-201ENSMUST00000209136 396 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm45626-201ENSMUST00000210093 361 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm45678-201ENSMUST00000210509 295 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm45739-201ENSMUST00000213094 388 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm18409-202ENSMUST00000220105 529 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm21937-201ENSMUST00000222825 218 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm25202-201ENSMUST00000082838 191 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.22□□□□□ -1.57
Hoxd3P09027 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.22□□□□□ -1.57
Hoxd3P09027 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.22□□□□□ -1.57
Hoxd3P09027 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hoxd3P09027 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxd3P09027 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxd3P09027 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxd3P09027 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hoxd3P09027 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.21□□□□□ -1.57
Hoxd3P09027 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Hoxd3P09027 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.21□□□□□ -1.57
Hoxd3P09027 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Hoxd3P09027 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.21□□□□□ -1.57
Hoxd3P09027 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hoxd3P09027 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm15073-201ENSMUST00000117432 634 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm12677-201ENSMUST00000118668 426 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm4853-201ENSMUST00000119359 394 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm15149-201ENSMUST00000119370 360 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm7494-201ENSMUST00000121248 441 ntBASIC5.21□□□□□ -1.58
Hoxd3P09027 Gm12293-201ENSMUST00000121898 590 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms