Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm44681-201ENSMUST00000208447 842 ntBASIC3.2□□□□□ -1.9
TcraP01849 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC3.2□□□□□ -1.9
TcraP01849 Gm18924-201ENSMUST00000211929 316 ntBASIC3.2□□□□□ -1.9
TcraP01849 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TcraP01849 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TcraP01849 AC154623.1-201ENSMUST00000224348 805 ntBASIC3.2□□□□□ -1.9
TcraP01849 AC164315.1-201ENSMUST00000226452 708 ntBASIC3.2□□□□□ -1.9
TcraP01849 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.2□□□□□ -1.9
TcraP01849 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.2□□□□□ -1.9
TcraP01849 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TcraP01849 Mir337-201ENSMUST00000083592 97 ntBASIC3.2□□□□□ -1.9
TcraP01849 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TcraP01849 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.2□□□□□ -1.9
TcraP01849 AC112142.1-203ENSMUST00000228670 2472 ntBASIC3.2□□□□□ -1.9
TcraP01849 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TcraP01849 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TcraP01849 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TcraP01849 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TcraP01849 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.19□□□□□ -1.9
TcraP01849 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.19□□□□□ -1.9
TcraP01849 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
TcraP01849 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TcraP01849 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm15148-201ENSMUST00000117602 156 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm11984-201ENSMUST00000118142 766 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm11822-201ENSMUST00000119177 415 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm12757-201ENSMUST00000119465 800 ntBASIC3.19□□□□□ -1.9
TcraP01849 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TcraP01849 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TcraP01849 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.19□□□□□ -1.9
TcraP01849 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.19□□□□□ -1.9
TcraP01849 Gm23327-201ENSMUST00000157420 78 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm24685-201ENSMUST00000157764 285 ntBASIC3.19□□□□□ -1.9
TcraP01849 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm5263-201ENSMUST00000163646 601 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm17044-201ENSMUST00000168549 828 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm23152-201ENSMUST00000175322 116 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.19□□□□□ -1.9
TcraP01849 Gm28190-201ENSMUST00000189766 722 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm37072-201ENSMUST00000194570 837 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm37601-201ENSMUST00000194922 394 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.19□□□□□ -1.9
TcraP01849 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
TcraP01849 Gm4859-201ENSMUST00000199625 787 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm44234-201ENSMUST00000204246 900 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm18007-201ENSMUST00000205019 844 ntBASIC3.19□□□□□ -1.9
TcraP01849 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TcraP01849 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.19□□□□□ -1.9
TcraP01849 AC161114.1-201ENSMUST00000218223 474 ntBASIC3.19□□□□□ -1.9
TcraP01849 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.19□□□□□ -1.9
TcraP01849 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.19□□□□□ -1.9
TcraP01849 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.19□□□□□ -1.9
TcraP01849 AC102542.1-201ENSMUST00000225204 1138 ntBASIC3.19□□□□□ -1.9
TcraP01849 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.19□□□□□ -1.9
TcraP01849 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.19□□□□□ -1.9
TcraP01849 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TcraP01849 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TcraP01849 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm23796-201ENSMUST00000084011 160 ntBASIC3.19□□□□□ -1.9
TcraP01849 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 AC140299.2-201ENSMUST00000219546 1969 ntBASIC3.19□□□□□ -1.9
TcraP01849 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
TcraP01849 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.19□□□□□ -1.9
TcraP01849 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TcraP01849 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TcraP01849 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms