Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm27543-201ENSMUST00000183562 177 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm27551-201ENSMUST00000184258 77 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm27492-201ENSMUST00000185194 187 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm28625-201ENSMUST00000188309 205 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm10292-202ENSMUST00000193165 585 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm37095-201ENSMUST00000195421 205 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm43136-201ENSMUST00000200403 636 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CtcflA2APF3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcflA2APF3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.09□□□□□ -1.76
CtcflA2APF3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CtcflA2APF3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CtcflA2APF3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CtcflA2APF3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.09□□□□□ -1.76
CtcflA2APF3 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.09□□□□□ -1.76
CtcflA2APF3 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcflA2APF3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcflA2APF3 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm24380-201ENSMUST00000122696 324 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm17081-201ENSMUST00000167363 478 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm26460-201ENSMUST00000175061 126 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm5777-201ENSMUST00000177265 448 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm28639-201ENSMUST00000191519 481 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm37631-201ENSMUST00000192275 364 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm37490-201ENSMUST00000195566 724 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm43044-201ENSMUST00000198091 379 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm43418-201ENSMUST00000201334 428 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcflA2APF3 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm29774-201ENSMUST00000219270 436 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.08□□□□□ -1.76
CtcflA2APF3 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm9472-201ENSMUST00000221625 526 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Gm9512-201ENSMUST00000223112 497 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcflA2APF3 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
CtcflA2APF3 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcflA2APF3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcflA2APF3 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm15670-201ENSMUST00000117740 447 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm23534-201ENSMUST00000157539 97 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm25383-201ENSMUST00000157810 144 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm22730-201ENSMUST00000158085 171 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm28097-201ENSMUST00000187333 366 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm3145-201ENSMUST00000188584 220 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm28769-201ENSMUST00000190176 615 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm43586-201ENSMUST00000195948 310 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.07□□□□□ -1.76
CtcflA2APF3 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.07□□□□□ -1.76
CtcflA2APF3 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcflA2APF3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms