Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm43580-201ENSMUST00000202892 284 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm5876-201ENSMUST00000203735 243 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm20946-201ENSMUST00000212367 461 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm18899-201ENSMUST00000217663 546 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Mir202-201ENSMUST00000083568 72 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upk3aQ9JKX8 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm12466-201ENSMUST00000121199 620 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm25966-201ENSMUST00000157169 117 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm28803-201ENSMUST00000190385 764 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm17953-201ENSMUST00000192061 667 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm37050-201ENSMUST00000193464 466 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm43825-201ENSMUST00000199650 734 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm19039-201ENSMUST00000204363 575 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm45200-201ENSMUST00000207434 919 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upk3aQ9JKX8 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm14854-201ENSMUST00000117758 841 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm6893-201ENSMUST00000118385 522 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm14933-201ENSMUST00000118840 481 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm25264-201ENSMUST00000158519 117 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm26983-201ENSMUST00000182051 388 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm42814-201ENSMUST00000199370 460 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm43710-201ENSMUST00000199583 452 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm4714-201ENSMUST00000203395 279 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm45081-201ENSMUST00000206281 572 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm45710-201ENSMUST00000212847 215 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm18871-201ENSMUST00000218655 745 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm22350-201ENSMUST00000083924 156 ntBASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upk3aQ9JKX8 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms