Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm23046-201ENSMUST00000158369 284 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm38268-201ENSMUST00000195813 193 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm43476-201ENSMUST00000197873 405 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm3148-201ENSMUST00000203594 612 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm22220-201ENSMUST00000082671 149 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm24166-201ENSMUST00000082724 135 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm26203-201ENSMUST00000082911 114 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm24217-201ENSMUST00000158260 133 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm29332-201ENSMUST00000190829 227 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm36247-201ENSMUST00000211834 285 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.95□□□□□ -1.62
Vps28Q9D1C8 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm12285-201ENSMUST00000117347 233 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm16128-201ENSMUST00000117855 626 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm11409-201ENSMUST00000118621 403 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm13132-201ENSMUST00000121194 472 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm24188-201ENSMUST00000157980 108 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Mir6344-201ENSMUST00000183462 104 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm17954-201ENSMUST00000195893 607 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm18997-201ENSMUST00000216353 822 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm23677-201ENSMUST00000083156 104 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm23846-201ENSMUST00000083835 107 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Vps28Q9D1C8 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.93□□□□□ -1.62
Vps28Q9D1C8 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms