Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm24689-201ENSMUST00000157760 104 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm21850-201ENSMUST00000179792 359 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm37601-201ENSMUST00000194922 394 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm19039-201ENSMUST00000204363 575 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm8724-201ENSMUST00000081668 483 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.21□□□□□ -1.73
Use1Q9CQ56 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Use1Q9CQ56 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm22498-201ENSMUST00000104497 86 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm10552-201ENSMUST00000113396 372 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm13451-201ENSMUST00000117649 592 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm8475-201ENSMUST00000118211 526 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm13677-201ENSMUST00000120739 595 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm5401-201ENSMUST00000122444 365 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm24251-201ENSMUST00000157324 114 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm4222-201ENSMUST00000165784 470 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Rab26os-201ENSMUST00000176215 477 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Mir7022-201ENSMUST00000183749 61 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm28625-201ENSMUST00000188309 205 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm43580-201ENSMUST00000202892 284 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm44237-201ENSMUST00000205183 936 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm45007-201ENSMUST00000206237 366 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm45359-201ENSMUST00000210635 427 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Snord15b-201ENSMUST00000083032 145 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Use1Q9CQ56 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
Use1Q9CQ56 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm25919-201ENSMUST00000104271 132 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm6754-201ENSMUST00000117124 913 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm12311-201ENSMUST00000118803 374 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm13213-201ENSMUST00000119668 474 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm22588-201ENSMUST00000157510 140 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm22730-201ENSMUST00000158085 171 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm2389-201ENSMUST00000160487 189 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm29332-201ENSMUST00000190829 227 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm18382-201ENSMUST00000194394 582 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm38334-201ENSMUST00000195060 313 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm36986-201ENSMUST00000195320 353 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm43919-201ENSMUST00000204303 364 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Gm45857-201ENSMUST00000212207 356 ntBASIC4.2□□□□□ -1.74
Use1Q9CQ56 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Use1Q9CQ56 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms