Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 Gm23514-201ENSMUST00000082827 130 ntBASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 Gm23452-201ENSMUST00000083327 107 ntBASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Pcdha9Q91Y11 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Pcdha9Q91Y11 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Pcdha9Q91Y11 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Pcdha9Q91Y11 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.4□□□□□ -1.55
Pcdha9Q91Y11 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Pcdha9Q91Y11 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm11970-201ENSMUST00000116105 320 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm4342-201ENSMUST00000118982 367 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm15357-201ENSMUST00000119160 285 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm14520-201ENSMUST00000119258 387 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm12734-201ENSMUST00000120228 948 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm23537-201ENSMUST00000157536 330 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm22326-201ENSMUST00000158897 351 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm17044-201ENSMUST00000168549 828 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm20648-201ENSMUST00000175815 328 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm18727-201ENSMUST00000185981 553 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm37088-201ENSMUST00000193887 406 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm43712-201ENSMUST00000198020 291 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm7825-201ENSMUST00000204046 416 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm45240-201ENSMUST00000211437 674 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm18487-201ENSMUST00000215826 878 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm9628-201ENSMUST00000222169 725 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdha9Q91Y11 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm11914-201ENSMUST00000117094 507 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm8202-201ENSMUST00000117682 310 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm24532-201ENSMUST00000157951 286 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm17154-201ENSMUST00000165748 431 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm26318-201ENSMUST00000176507 96 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm21809-201ENSMUST00000178495 468 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm17412-201ENSMUST00000179261 468 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm18635-201ENSMUST00000199020 1060 ntBASIC5.38□□□□□ -1.55
Pcdha9Q91Y11 Gm44050-201ENSMUST00000204263 527 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms