Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm8604-201ENSMUST00000183150 965 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm27817-201ENSMUST00000184302 233 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm37708-201ENSMUST00000192337 895 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm42522-201ENSMUST00000196071 255 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm44395-201ENSMUST00000197056 153 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm23875-201ENSMUST00000083711 318 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm43958-201ENSMUST00000204360 3544 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm15073-201ENSMUST00000117432 634 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm13579-201ENSMUST00000118519 517 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm12444-201ENSMUST00000121512 877 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm24898-201ENSMUST00000158133 106 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm16114-201ENSMUST00000161930 300 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm22411-201ENSMUST00000175462 126 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm22002-201ENSMUST00000175622 125 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm5285-201ENSMUST00000193089 666 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm44181-201ENSMUST00000203106 483 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm18598-201ENSMUST00000207724 597 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Snord21-201ENSMUST00000082519 94 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm25800-201ENSMUST00000082636 134 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Gm23456-201ENSMUST00000083335 137 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.7□□□□□ -1.5
Ccdc9Q8VC31 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm37006-201ENSMUST00000195253 2674 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm22032-201ENSMUST00000116946 116 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm6134-201ENSMUST00000117265 171 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm13245-201ENSMUST00000119646 260 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm13259-201ENSMUST00000120792 456 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm13865-201ENSMUST00000120957 865 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm6565-201ENSMUST00000121217 438 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm23250-201ENSMUST00000157444 267 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm26347-201ENSMUST00000157526 131 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Gm17164-201ENSMUST00000169013 506 ntBASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc9Q8VC31 Mir6938-201ENSMUST00000184173 63 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms