Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm26146-201ENSMUST00000104478 185 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm11255-201ENSMUST00000120448 1180 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Mir6345-201ENSMUST00000184286 128 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm43855-201ENSMUST00000197462 507 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm7618-201ENSMUST00000121643 171 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm24998-201ENSMUST00000157908 89 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm43390-201ENSMUST00000196614 421 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm34779-201ENSMUST00000210036 263 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm8748-201ENSMUST00000211125 587 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a6Q8C6K9 Gm44518-201ENSMUST00000208080 4370 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm13785-201ENSMUST00000119099 690 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm44003-201ENSMUST00000203024 490 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 AC123944.2-201ENSMUST00000215290 382 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm24147-201ENSMUST00000082763 144 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm7381-201ENSMUST00000098958 300 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm6900-201ENSMUST00000178971 342 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm37881-201ENSMUST00000193001 421 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm44023-201ENSMUST00000203710 469 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm37370-201ENSMUST00000191996 1410 ntBASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a6Q8C6K9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
Col6a6Q8C6K9 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm14621-201ENSMUST00000117709 689 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm11393-201ENSMUST00000118019 288 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm16290-201ENSMUST00000161175 474 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm29634-201ENSMUST00000188467 696 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm28699-201ENSMUST00000189193 696 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm37601-201ENSMUST00000194922 394 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.77□□□□□ -1.81
Col6a6Q8C6K9 Gm42453-201ENSMUST00000200477 409 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms