Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm14657-201ENSMUST00000117461 302 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm11572-201ENSMUST00000119164 120 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 BC002163-201ENSMUST00000121906 319 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm14328-201ENSMUST00000122178 408 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim35Q8C006 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm15843-201ENSMUST00000146593 529 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm22767-201ENSMUST00000158365 165 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm43215-201ENSMUST00000199108 252 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm4045-201ENSMUST00000204076 310 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm39197-201ENSMUST00000212069 457 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm31931-201ENSMUST00000219666 222 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm17229-202ENSMUST00000166792 1753 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm24715-201ENSMUST00000102377 95 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm12468-201ENSMUST00000116189 404 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm11969-201ENSMUST00000118848 356 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm11623-201ENSMUST00000120176 1225 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm13466-201ENSMUST00000121515 999 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm11931-201ENSMUST00000121630 447 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm6969-201ENSMUST00000140065 342 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm22531-201ENSMUST00000158819 140 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm6003-201ENSMUST00000187903 463 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm38373-201ENSMUST00000192042 288 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm43250-201ENSMUST00000196536 273 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim35Q8C006 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm29774-201ENSMUST00000219270 436 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm5316-201ENSMUST00000050391 270 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Mir452-201ENSMUST00000093629 85 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm3203-201ENSMUST00000197670 2389 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 AC102847.2-201ENSMUST00000227799 2906 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim35Q8C006 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Trim35Q8C006 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim35Q8C006 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.72□□□□□ -1.17
Trim35Q8C006 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Gm42704-201ENSMUST00000196875 1778 ntBASIC7.71□□□□□ -1.17
Trim35Q8C006 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Gm14429-201ENSMUST00000121881 2024 ntBASIC7.71□□□□□ -1.17
Trim35Q8C006 Gm36960-201ENSMUST00000195491 2035 ntBASIC7.71□□□□□ -1.17
Trim35Q8C006 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim35Q8C006 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.71□□□□□ -1.17
Trim35Q8C006 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm13239-201ENSMUST00000119920 637 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm12123-201ENSMUST00000120348 472 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 n-R5s80-201ENSMUST00000122596 111 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms