Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.79□□□□□ -1.16
Clcn1Q64347 AC164297.6-201ENSMUST00000224643 1568 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm7646-201ENSMUST00000198590 1346 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm38137-201ENSMUST00000193735 1401 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm37250-201ENSMUST00000194919 2388 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clcn1Q64347 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm12901-201ENSMUST00000118690 532 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm13170-201ENSMUST00000119716 643 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm14980-201ENSMUST00000121247 736 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.78□□□□□ -1.16
Clcn1Q64347 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm25454-201ENSMUST00000157947 315 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm25718-201ENSMUST00000158632 118 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm4134-201ENSMUST00000173244 563 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm24369-201ENSMUST00000175387 96 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Mir3095-201ENSMUST00000175552 87 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm24897-201ENSMUST00000179033 107 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm21399-201ENSMUST00000180210 597 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm8863-201ENSMUST00000216630 926 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 CT025606.1-201ENSMUST00000218273 324 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm9309-201ENSMUST00000223537 546 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 AC154583.1-201ENSMUST00000224788 655 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Gm22997-201ENSMUST00000082845 107 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.78□□□□□ -1.16
Clcn1Q64347 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clcn1Q64347 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clcn1Q64347 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Clcn1Q64347 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Clcn1Q64347 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm25345-201ENSMUST00000104505 133 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Mir5125-201ENSMUST00000175240 79 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC7.77□□□□□ -1.17
Clcn1Q64347 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm5731-201ENSMUST00000190969 481 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm22265-201ENSMUST00000082947 116 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.77□□□□□ -1.17
Clcn1Q64347 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clcn1Q64347 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.76□□□□□ -1.17
Clcn1Q64347 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.76□□□□□ -1.17
Clcn1Q64347 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clcn1Q64347 AC134596.1-201ENSMUST00000222016 1922 ntBASIC7.76□□□□□ -1.17
Clcn1Q64347 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clcn1Q64347 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Clcn1Q64347 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clcn1Q64347 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clcn1Q64347 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms