Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim58Q5NCC9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim58Q5NCC9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim58Q5NCC9 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm23906-201ENSMUST00000157573 128 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm23207-201ENSMUST00000158665 102 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Trbv10-201ENSMUST00000168322 289 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm27899-201ENSMUST00000184715 64 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm28263-201ENSMUST00000185884 400 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm34272-201ENSMUST00000208886 253 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim58Q5NCC9 Svet1-201ENSMUST00000209370 3940 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm14067-201ENSMUST00000119340 314 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm22453-201ENSMUST00000122801 318 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm27468-201ENSMUST00000183577 106 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm18698-201ENSMUST00000192327 668 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm36259-201ENSMUST00000197340 392 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm17887-201ENSMUST00000200194 547 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm4714-201ENSMUST00000203395 279 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.34□□□□□ -1.55
Trim58Q5NCC9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
Trim58Q5NCC9 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
Trim58Q5NCC9 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.34□□□□□ -1.56
Trim58Q5NCC9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Trim58Q5NCC9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim58Q5NCC9 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm14750-201ENSMUST00000118262 516 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm13478-201ENSMUST00000118312 413 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm12328-201ENSMUST00000118611 197 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm22314-201ENSMUST00000158007 281 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm22135-201ENSMUST00000158752 108 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm18320-201ENSMUST00000211304 595 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm18377-201ENSMUST00000215141 607 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim58Q5NCC9 Mir134-201ENSMUST00000083492 71 ntBASIC5.33□□□□□ -1.56
Trim58Q5NCC9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms